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Durable Conversation Summary (Phase 3)

This page serves as a sanitized, durable summary for Phase 3 work. It captures the active milestones, current status, and next actions, without referencing any local-only planning artifacts.

Milestones (Active)

  • M1: Phase 3 docs sync and strict build (status: in progress)
  • M2: Fill high-value placeholders (advanced workflows, SQL, Bio, Testing) (status: planned)
  • M3: Permissions tutorial + Entity advanced examples (status: planned)
  • M4: Rust distribution guide and CI matrix draft (status: planned)
  • M5: AI notebook + CLI walkthrough (status: planned)

Current Focus

  • Ensure MkDocs navigation and links are valid and pass mkdocs build --strict.
  • Provide minimal but useful content on placeholder pages so users get actionable guidance.

Next Actions

  • Add/expand pages:
  • docs/yaml-workflows/advanced.md (variables, conditionals, retries, progress/cancel, Rust executor usage)
  • docs/sql-support/duckdb.md and docs/sql-support/databases.md
  • docs/bioframe-integration/index.md (overlap/coverage/cluster examples)
  • docs/testing-quality/index.md (testing strategy, coverage, lint/type gates)
  • Validate docs build: mkdocs build --strict
  • Cross-link new/updated content from the index and related sections.

Validation Gate

  • Successful mkdocs build --strict and working site navigation.

Notes

  • This document intentionally avoids any private/local planning references and is safe to keep in the repository.